Insertion junction: CLIP2.006030_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.006030
Chromosome:chromosome 12
Location:94824
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g483950 MDN4,MDH4 (1 of 3) K00026 - malate dehydrogenase (MDH2); Malate dehydrogenase 4 3'UTR
Cre12.g484000 BCX1,ACX1 Beta-carboxyltransferase (ACCase complex); (1 of 1) K01963 - acetyl-CoA carboxylase carboxyl transferase subunit beta (accD) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACACAATGACAAGGTAGCCCACCCAAGGTGGCCTGTTTGCCAAACAATC
Internal bar code:CTATGGCCAATTGCGCACTCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:3336
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:82
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:82

Suggested primers for confirmation by PCR

Suggested primer 1:TCGAGAAGGGTGTGCAGTTC
Suggested primer 2:GTATACAGGGCGTGGAGTCG