Insertion junction: CLIP2.006034_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.006034
Chromosome:chromosome 16
Location:3152496
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g665100 CAV3 Voltage-gated Ca2+ channel, alpha subunit; (1 of 1) IPR000048//IPR005821 - IQ motif, EF-hand binding site // Ion transport domain 5'UTR
Cre16.g665200 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGGAGTGCACGTGTTTTGGGGGGGGGGGGGGGGGGCAGCGCAGGCGGCC
Internal bar code:ACGCCAAAGAAGAAGTTTAGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:4002
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:CATTTCTTATGGTGCCGCGG
Suggested primer 2:TACGTGCGTGGCCTTAACTT