Insertion junction: CLIP2.006034_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.006034
Chromosome:chromosome 16
Location:3152496
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g665100 CAV3 Voltage-gated Ca2+ channel, alpha subunit; (1 of 1) IPR000048//IPR005821 - IQ motif, EF-hand binding site // Ion transport domain 5'UTR
Cre16.g665200 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCTAATCCGCTCGCCAGATGCAAGTTGTCCGGCCCCCCTCCATCAGCGC
Internal bar code:ATGGCGTGCGATTATCCATCCA

Confirmation - LEAP-Seq

LEAP-Seq distance:5184
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:74
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:74

Suggested primers for confirmation by PCR

Suggested primer 1:TACGTGCGTGGCCTTAACTT
Suggested primer 2:CATTTCTTATGGTGCCGCGG