Insertion junction: CLIP2.006036_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.006036
Chromosome:chromosome 3
Location:3318455
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g165850 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCCAGCTGTCAATTCGGGCATTGCGTTTTGCTGCTAGCTGCGCGATAGC
Internal bar code:TCGCGCCAACTAGATTCTAGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1754
LEAP-Seq percent confirming:96.2963
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:TCTCCGCCTTCCGTAACAAC
Suggested primer 2:CCATGCTCCAAGCGATTTCG