Insertion junction: CLIP2.006037_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.006037
Chromosome:chromosome 1
Location:2038466
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g011200 (1 of 1) PF04658 - TAFII55 protein conserved region (TAFII55_N) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTCATGGAGTGCGGGATCACGGCACAGGAATGAGCGCCACGGGTTAACT
Internal bar code:AATGAGGTGTAGTTCCGGGATA

Confirmation - LEAP-Seq

LEAP-Seq distance:3724
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:70
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:70

Suggested primers for confirmation by PCR

Suggested primer 1:TCGTCCAGGGTTTCTTCACG
Suggested primer 2:CTGCCGAGGCTAATCTACCG