Insertion junction: CLIP2.006039_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.006039
Chromosome:chromosome 3
Location:4165117
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g800327 (1 of 3) 3.2.1.39 - Glucan endo-1,3-beta-D-glucosidase / Laminarinase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGAGGGATCAGGGATGAGTGGGGCGCGCGCCGGCAGGCATGGGCTAGCT
Internal bar code:TGATCGACTGCTAAATCCCTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2782
LEAP-Seq percent confirming:96.2963
LEAP-Seq n confirming:52
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:54

Suggested primers for confirmation by PCR

Suggested primer 1:CCATGAACACTCACGGGTGA
Suggested primer 2:CAACACCAGCAAGGAAGTGC