Insertion junction: CLIP2.006039_4

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.006039
Chromosome:chromosome 14
Location:1488395
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g617600 DEG9 Deg protease; (1 of 4) PTHR22939//PTHR22939:SF83 - SERINE PROTEASE FAMILY S1C HTRA-RELATED // PROTEASE DO-LIKE 2, CHLOROPLASTIC intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCATTCCCAACCACCGCCTGTGTGAACGTGTGGAAATGGAAGACGACAC
Internal bar code:TAGGGCTCGTTCCTTTGCTGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:6441
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:99
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:99

Suggested primers for confirmation by PCR

Suggested primer 1:TTTGCGGGTGTCTGCTGTAT
Suggested primer 2:ATGAATGTGTAAGGGCGGCA