Insertion junction: CLIP2.006040_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.006040
Chromosome:chromosome 8
Location:1576981
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g365500 3'UTR
Cre08.g365550 (1 of 228) IPR029063 - S-adenosyl-L-methionine-dependent methyltransferase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCGCCTGGACGTGTTACTTCAGGCGCTTGGTCCCTGAAGTAACATGTTG
Internal bar code:GATTCCCCCGCAGGGTAAGTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1073
LEAP-Seq percent confirming:44.4444
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:TTTGTGGAGGAGTGGACGTG
Suggested primer 2:TCGTTGACGGAGGTTCACAG