Insertion junction: CLIP2.006047_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.006047
Chromosome:chromosome 3
Location:636459
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre03.g145587 CPLD1 Conserved in the Plant Lineage and Diatoms; (1 of 4) PF04134 - Protein of unknown function, DUF393 (DUF393) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGGAACCCTCGCCCCTGCCCCCAACCGCGCCCCTGCCCCAACTTGCTT
Internal bar code:AAATTGTCCTTCGCTGCTCAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:440
LEAP-Seq percent confirming:15.625
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:27
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:GCACATTAGCACTTCGCCAG
Suggested primer 2:CGTTTTGCACTTGGCCATGA