Insertion junction: CLIP2.006048_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.006048
Chromosome:chromosome 9
Location:1045426
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g402051 CLV4 Voltage-gated chloride channel; (1 of 1) PTHR11689//PTHR11689:SF89 - CHLORIDE CHANNEL // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCCATTCAGGCCCCACCCCTCCTTTTCACCCCGCCCGCCTCCACTCTAA
Internal bar code:GACTCAGTTCGAGGGTACCTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:58
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:TGCAGAGTGTGTGTGTGTGT
Suggested primer 2:AATGATTCCACCACACCGCT