Insertion junction: CLIP2.006053_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.006053
Chromosome:chromosome 17
Location:3276451
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g721950 (1 of 1) PTHR11685:SF119 - E3 UBIQUITIN-PROTEIN LIGASE ARI2-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTTCTTATGAGCGTTGGCAAACCCACATGCCAACGGTGCCTGCGAGCAT
Internal bar code:TACGTGTGAATCGTGTCTATGG

Confirmation - LEAP-Seq

LEAP-Seq distance:908
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:CCACCTTGTTGCCCATTTGG
Suggested primer 2:GCTACGAGTACGAGGAAGGC