Insertion junction: CLIP2.006056_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.006056
Chromosome:chromosome 6
Location:8019948
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g304850 (1 of 1) PF04424 - Protein of unknown function (DUF544) (DUF544) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTTGAGCCCAACGTGCCCGTGATGCTCAGCCCGCAGGCCTCAGCGGAGG
Internal bar code:TGTTCATGGACAGATTGCGTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1190
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GTCTCCACCTCCACCGTTAG
Suggested primer 2:ATGCCTCCCATTCTCCTCCT