Insertion junction: CLIP2.006058_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.006058
Chromosome:chromosome 4
Location:1680270
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g212500 CGL42 (1 of 6) PF09353 - Domain of unknown function (DUF1995) (DUF1995); Conserved in the Green Lineage intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTGGGCCCGGTGCGACTCCCCGTGTGACCTCGCAGGCGGGGCAACCCGG
Internal bar code:ACCGAGACGGTAGGACACATTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1782
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:ACCCAACGGTTGCTACAACT
Suggested primer 2:TGCAGGAGGTACCGTATGGA