Insertion junction: CLIP2.006058_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.006058
Chromosome:chromosome 4
Location:1680272
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g212500 CGL42 (1 of 6) PF09353 - Domain of unknown function (DUF1995) (DUF1995); Conserved in the Green Lineage intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCGACAGAACCGTTCACGCGCTCGCAACCCGGTTCCGAGCAGGTTTATT
Internal bar code:ACCGAGACGGTAGGACACATTA

Confirmation - LEAP-Seq

LEAP-Seq distance:254
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:TGCAGGAGGTACCGTATGGA
Suggested primer 2:ACCCAACGGTTGCTACAACT