Insertion junction: CLIP2.006058_4

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.006058
Chromosome:chromosome 12
Location:3204539
Confidence (%):80
Locus systematic id Locus common name Defline Feature
intergenic

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGTCCCGGTGATATTCAGGACGTGTAAGAACGTTGAGGCAAATTTGACG
Internal bar code:AATAATAGGGCACTTGTATTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1056
LEAP-Seq percent confirming:60.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:CGTTCACTTCAGCGTGCAAA
Suggested primer 2:GGGAGGGGAGGGTTGTAGAT