Insertion junction: CLIP2.006059_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.006059
Chromosome:chromosome 16
Location:7952291
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g690879 FAP173 (1 of 1) PTHR10264//PTHR10264:SF84 - BAND 7 PROTEIN-RELATED // HYPERSENSITIVE-INDUCED RESPONSE PROTEIN 2; Flagellar Associated Protein 173 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCGGATTATTGTCCCGGAGCTCCTTTGCTTCGGCGCCCTATTAATTGCT
Internal bar code:ATAAGGTCTGTTTCGCGTTACA

Confirmation - LEAP-Seq

LEAP-Seq distance:2334
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:TCACGGCGGCATATCTACAC
Suggested primer 2:CCACGTCCTGGTGAATGACA