Insertion junction: CLIP2.006062_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.006062
Chromosome:chromosome 6
Location:6348327
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g293100 (1 of 2) PTHR19957:SF124 - SYNTAXIN-8B-RELATED CDS/intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCAGAGCGTCGCAGTCATAGCCCAGGTTGCCTGCCAGCCTTGCCACATC
Internal bar code:TTCGGATTCTGGTTTCGTTGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:4060
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:CTCTTGCTGCTGGGGATGAA
Suggested primer 2:TACGGCTCTGGGGAGATGAA