Insertion junction: CLIP2.006068_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.006068
Chromosome:chromosome 6
Location:3249263
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g277100 (1 of 4) PF03435 - Saccharopine dehydrogenase NADP binding domain (Sacchrp_dh_NADP) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTAAGATGTGCACGCCGTATCACCGTGACGGTGCGTGTCTGACAGCCGCG
Internal bar code:CGCGGGTATTAAAAGTTACTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2835
LEAP-Seq percent confirming:94.2857
LEAP-Seq n confirming:66
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:70

Suggested primers for confirmation by PCR

Suggested primer 1:CCCTCCACACACACAGATCC
Suggested primer 2:CCAGCAGTGCAGGATCTTGA