Insertion junction: CLIP2.006086_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.006086
Chromosome:chromosome 3
Location:5416093
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g183850 FDX6 (1 of 1) IPR001041//IPR010241//IPR012675 - 2Fe-2S ferredoxin-type iron-sulfur binding domain // Ferredoxin [2Fe-2S], plant // Beta-grasp domain; Apoferredoxin, chloroplast precursor 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCTCAACCCAGTCCTGATGAGGTCAAAGGTCAATGGTTCAGTCACATAG
Internal bar code:TCTTGCACTGGGAACTTAATAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2652
LEAP-Seq percent confirming:96.2963
LEAP-Seq n confirming:52
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:54

Suggested primers for confirmation by PCR

Suggested primer 1:AAGACACTTGAGCGACCAGG
Suggested primer 2:GGCCATTAGACGACCCTACG