Insertion junction: CLIP2.006092_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.006092
Chromosome:chromosome 10
Location:5778137
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g460050 FLU1,FLU,FLP (1 of 1) PTHR10098//PTHR10098:SF123 - RAPSYN-RELATED // SUBFAMILY NOT NAMED; FLU protein, chloroplast precursor 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACATCGCGACCAGCGCCATGCCTCAAATCCCGCAACACATAAGGCGGCA
Internal bar code:TGTAATGCCGTCGGGCTAGTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1634
LEAP-Seq percent confirming:96.2963
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:GACGGAAGGCTGGAGGAAAA
Suggested primer 2:GACCTCACGATACGGGTGTG