Insertion junction: CLIP2.006093_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.006093
Chromosome:chromosome 6
Location:3511768
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278117 CPLD7 Conserved in the Plant Lineage and Diatoms; (1 of 98) IPR023214 - HAD-like domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGAATGTAACCCCCTCCACGCCCGCTACTCCGCTGCGCCCGCTTCTTCG
Internal bar code:TGCATATCACGGCCTCGCGGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:501
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:AGGGGGAGCTGGTAGAGAAG
Suggested primer 2:CTTGAGAGCGTGTGGACACT