Insertion junction: CLIP2.006097_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.006097
Chromosome:chromosome 6
Location:3640022
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278141 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCTTTAAATGGCCACCTGGAGGCCGTGAGGTACCTGGCTGAAGTGTTGG
Internal bar code:GGCAGTTTCCTACTTAAACGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1388
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:TGTACCGCTCCAGATCCAGA
Suggested primer 2:GACCTGACATAGCCGACGAG