Insertion junction: CLIP2.006106_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.006106
Chromosome:chromosome 1
Location:6896671
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g049350 (1 of 1) PTHR31412//PTHR31412:SF5 - FAMILY NOT NAMED // ZINC METALLOPROTEASE EGY2, CHLOROPLASTIC-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGTGATGGTCCCCGCGCACGCGCCACCTCTTGACCTTCAATCTGCAACC
Internal bar code:CGCTTTGCGTTGATGTTGCTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:2130
LEAP-Seq percent confirming:92.8571
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:CGAAGAAGAATGCGAGCACG
Suggested primer 2:GACAAGGAGGAGAAGCCCAC