Insertion junction: CLIP2.006106_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.006106
Chromosome:chromosome 1
Location:6896676
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g049350 (1 of 1) PTHR31412//PTHR31412:SF5 - FAMILY NOT NAMED // ZINC METALLOPROTEASE EGY2, CHLOROPLASTIC-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCCTGAGTCCAGTGCGGAGATCCGAGCTACCGGTAGCTAGAGCGTGCCT
Internal bar code:ATTTAAGGGGGGGGAAGACGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:4262
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:GACAAGGAGGAGAAGCCCAC
Suggested primer 2:CGAAGAAGAATGCGAGCACG