Insertion junction: CLIP2.006109_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.006109
Chromosome:chromosome 12
Location:6597977
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g538700 CPLD62 Conserved in the Plant Lineage and Diatoms; (1 of 2) PF07766 - LETM1-like protein (LETM1) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGACGATGCGGTCGTCACTTCCAACGAGCGGCGTTGGCCAGGCCAGCAC
Internal bar code:GCTACTAGATGCGCAAGATCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1406
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:CTTCTAAGGGAGCCTCGCTG
Suggested primer 2:GCGGTCGGTTATAAGGAGGG