Insertion junction: CLIP2.006110_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.006110
Chromosome:chromosome 7
Location:4659628
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g344771 (1 of 41) PTHR32523//PTHR32523:SF8 - FAMILY NOT NAMED // PHYTOL KINASE 1, CHLOROPLASTIC CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCTCGCCCGTAGCAGTAGCCGCCGCTGCAGCCGCCGCCTCTGCGACCAT
Internal bar code:CTTTCATTCACCGCTATATGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:611
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:27
LEAP-Seq n unique pos:54

Suggested primers for confirmation by PCR

Suggested primer 1:AGGGTGTGACGCCAACTATG
Suggested primer 2:AACTTTACCTGCCCCATCCG