Insertion junction: CLIP2.006114_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.006114
Chromosome:chromosome 16
Location:113258
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g695450 SPL11,UAF4 U2 snRNP auxiliary factor, large subunit; (1 of 1) PTHR23139:SF68 - ZINC FINGER CCHC-TYPE AND RNA-BINDING MOTIF-CONTAINING PROTEIN 1 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATCCTCAGGTATGGGTTACCAAAGGTTTGTTGGAATTGCGGCGCCCCCT
Internal bar code:TAATTGTCAGACTCGAGCGCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2392
LEAP-Seq percent confirming:86.2069
LEAP-Seq n confirming:100
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:116

Suggested primers for confirmation by PCR

Suggested primer 1:TGGTACTCACTGTCGCCAAC
Suggested primer 2:CCAACCCCGGCTATATGTCC