Insertion junction: CLIP2.006116_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.006116
Chromosome:chromosome 10
Location:3251568
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g442650 (1 of 1) PTHR10887:SF366 - DNA-BINDING PROTEIN-RELATED outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTGGAAGTATCATATAGGTCTGCTGGGGGTTGCGAGCAGCCATACTACC
Internal bar code:GATAACAGAGTCTGCGGTCTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2320
LEAP-Seq percent confirming:10.7143
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:25
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:GTTCTCATAACGTGTCGCGC
Suggested primer 2:TGCAGCCCAACGACAATTTG