Insertion junction: CLIP2.006117_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.006117
Chromosome:chromosome 6
Location:8019529
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g304850 (1 of 1) PF04424 - Protein of unknown function (DUF544) (DUF544) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTCTGGAGGCGTTGTTAGACTCACGCACCTCATTTTTTCTTACTGGGAA
Internal bar code:TATCCCTTTTGTTTGTTGTTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:333
LEAP-Seq percent confirming:1.19048
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:83
LEAP-Seq n unique pos:84

Suggested primers for confirmation by PCR

Suggested primer 1:ACGTTGGGCTCAAGCTTCA
Suggested primer 2:CGTCCCGTATATGTGTGGGG