Insertion junction: CLIP2.006123_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.006123
Chromosome:chromosome 12
Location:5545856
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g530750 (1 of 239) IPR016024 - Armadillo-type fold intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTGCAGGCGAGGGGCTGGCCGGTAGTATGCATGTTCCATGCACGTCTGA
Internal bar code:CCTATAGTGCTAGCACACCAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2068
LEAP-Seq percent confirming:59.0909
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:GAGGAAAGGACATGGTGGGG
Suggested primer 2:CCACGCTGGTAGGAGCATAG