Insertion junction: CLIP2.006125_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.006125
Chromosome:chromosome 11
Location:1583611
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g468377 (1 of 1) K12602 - WD repeat-containing protein 61 (WDR61, REC14, SKI8) 5'UTR_intron
Cre11.g801259 3'UTR_intron
Cre11.g801260 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCTTTGGGGTGAGTGACGGCGGGCACGCGTGCGGCGTGCCGACGCGCCA
Internal bar code:AGGGGTATAGTAAAAAGCTGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2882
LEAP-Seq percent confirming:29.0323
LEAP-Seq n confirming:45
LEAP-Seq n nonconfirming:110
LEAP-Seq n unique pos:155

Suggested primers for confirmation by PCR

Suggested primer 1:CTCTGAGTAGCAGCTACGGC
Suggested primer 2:ATCACGAAGGCGGAGTTTGT