Insertion junction: CLIP2.006131_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.006131
Chromosome:chromosome 1
Location:6911948
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g049600 CGLD22 (1 of 1) K02116 - ATP synthase protein I (atpI); Assembly factor for chloroplast ATPase outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCGGCCATTGCTTTGCTGCACTCTGTTTGCATTTTCTCTGCGGCTGCCT
Internal bar code:CACTTCGTATACGATTGCAAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:4340
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:100
LEAP-Seq n nonconfirming:20
LEAP-Seq n unique pos:120

Suggested primers for confirmation by PCR

Suggested primer 1:AACGCTCCTATCGGCTAAGC
Suggested primer 2:TGCGCATGTGTTGAATGTGG