Insertion junction: CLIP2.006134_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.006134
Chromosome:chromosome 9
Location:6267615
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g413800 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGCTTGATGGGTTTCTGGATCTTGCCGCGCACCTCAGGCAGCAGCGCCT
Internal bar code:ACCCGAATGACTGATACCGGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:823
LEAP-Seq percent confirming:56.25
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:GGTTGAGGCGTGAAACACAC
Suggested primer 2:CACAGTAAGCAACGCAACCC