Insertion junction: CLIP2.006145_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.006145
Chromosome:chromosome 1
Location:5354737
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g037700 FAD3,FAD9,delta4FAD (1 of 2) PTHR19353//PTHR19353:SF30 - FATTY ACID DESATURASE 2 // FATTY ACID DESATURASE 2; Delta4-fatty acid desaturase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCATAGAATAGAGCACGTCCGCTGTGCTTATCATCGGCCCCTGTGCCG
Internal bar code:ACAAAGTACGCTTCGGCCAATA

Confirmation - LEAP-Seq

LEAP-Seq distance:1485
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:GATGATGTATGGACCGCGGT
Suggested primer 2:GCTGGTCGTGGTACTTGTCA