Insertion junction: CLIP2.006149_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.006149
Chromosome:chromosome 7
Location:804598
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g318200 CGLD34 (1 of 2) IPR001214//IPR019734 - SET domain // Tetratricopeptide repeat; histone methyltransferase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGTCCATGGGGCTGTCCACACGCAGGAAGGGCTGGGAGTCAGCCGAGCC
Internal bar code:TCAATACATATCGCATTGGTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:3632
LEAP-Seq percent confirming:92.5926
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:GTTTCCCCCAATGTTTCCGC
Suggested primer 2:CCTGCTCTGTTGCTTGGGTA