Insertion junction: CLIP2.006152_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.006152
Chromosome:chromosome 1
Location:4691021
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g032500 DNJ8,TPR2 Tetratricopeptide-repeat protein 2; (1 of 1) K09523 - DnaJ homolog subfamily C member 3 (DNAJC3) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGAAGTTATGGGGTTGCCTTAGACGCCGGCTTTTTGGCAAGCAGCCTCG
Internal bar code:TTCTCCGAAACGTCAAGTCGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:360
LEAP-Seq percent confirming:3.7037
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:26
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:CACACACCTGCACAAACTCG
Suggested primer 2:GACTCGGTAGCGCGTATTGA