Insertion junction: CLIP2.006166_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.006166
Chromosome:chromosome 6
Location:8411988
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre06.g308100 ECH2 Enoyl-CoA hydratase 2; (1 of 2) 4.2.1.119 - Enoyl-CoA hydratase 2 / ECH2 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTTGGCCTGCATGTCCACCAGCTCGGGCCGGCTGACCAGCTGCCCGCCC
Internal bar code:TGGTTCAGGTCTTTCGAAAAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:144
LEAP-Seq percent confirming:60.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:CTTCCTAGTGGCAACCAGGG
Suggested primer 2:AAGGAGGTGGCCCTAAAAGC