Insertion junction: CLIP2.006172_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.006172
Chromosome:chromosome 7
Location:829922
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g318350 CGL64 (1 of 4) PF12576 - Protein of unknown function (DUF3754) (DUF3754); Conserved in the Green Lineage intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTTGCAACCCTGCTCTCCCTCTCCCCCTCTCCCTCCCCTTCTCTGTATT
Internal bar code:TCGTGTGGAGGCGGTCGTATCA

Confirmation - LEAP-Seq

LEAP-Seq distance:186
LEAP-Seq percent confirming:44.4444
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:ATGCTCAAGTCCTTCTGGGC
Suggested primer 2:GAGAGCGTGTGAGTGTGTGA