Insertion junction: CLIP2.006178_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.006178
Chromosome:chromosome 1
Location:5424686
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g038200 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGACCAGTGGCCTTTGCTGCTGAATTTTGTGTCCAACAATAGGTGTGGG
Internal bar code:ATAGGAGTACATTGCTCTAGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1178
LEAP-Seq percent confirming:74.359
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:ATGCTGTACTTGGTGAGGCC
Suggested primer 2:GTGTTTGTGACGGACTGCAC