Insertion junction: CLIP2.006187_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.006187
Chromosome:chromosome 7
Location:2788545
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g331500 CLPR3 (1 of 2) PTHR10381//PTHR10381:SF18 - ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT // SUBFAMILY NOT NAMED; inactive subunit of chloroplast ClpP complex 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGGCAGCCCAGCATGCGAGCCTGAAGATGGGTGCTGTCAGCGGGTGTCG
Internal bar code:GACATTACCACCTCCGAGTATG

Confirmation - LEAP-Seq

LEAP-Seq distance:2086
LEAP-Seq percent confirming:61.7021
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:47

Suggested primers for confirmation by PCR

Suggested primer 1:GTTGTACGGTGTGTGTGTGC
Suggested primer 2:CGCATGTAAACTCTTCGCCG