Insertion junction: CLIP2.006193_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.006193
Chromosome:chromosome 6
Location:2827634
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g271950 CGL135,GC6 (1 of 1) PTHR10013 - GENERAL VESICULAR TRANSPORT FACTOR P115; Conserved in the green lineage 135 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACCCATGTCAGAAGCGGACTTGCACCGGCAAGCGGAGCGAGCTTTCTGC
Internal bar code:GCTTGGCGTAGCCACGTCGCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:266
LEAP-Seq percent confirming:11.1111
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:56
LEAP-Seq n unique pos:63

Suggested primers for confirmation by PCR

Suggested primer 1:GCTTGGTTGCTCAAGTTCCG
Suggested primer 2:TTGCAATGGACATTTGGCGG