Insertion junction: CLIP2.006196_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.006196
Chromosome:chromosome 15
Location:5309105
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre17.g734548 PPD2 Pyruvate phosphate dikinase; (1 of 1) 2.7.11.32//2.7.9.1 - [Pyruvate, phosphate dikinase] kinase / Pyruvate, phosphate dikinase regulatory protein // Pyruvate, phosphate dikinase / Pyruvate,phosphate dikinase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGTAGAGAGCACGCCGCATGTACCTTGCTCGCTTTGTTGTTGTGTTGTT
Internal bar code:ACTGATAGCCTTCGCCTGGGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:560
LEAP-Seq percent confirming:56.0
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:CTGGTATCTACAACCCCGCC
Suggested primer 2:CTTTGGGCTTTGAAACCCCG