Insertion junction: CLIP2.006204_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.006204
Chromosome:chromosome 9
Location:5334301
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g407650 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGATCCGGTGGTCGGGTTGGTCATGAGTTGGTCCGGCGTAGGCTGGCGCG
Internal bar code:CGGTAGGGTCGGATAAAAATGA

Confirmation - LEAP-Seq

LEAP-Seq distance:482
LEAP-Seq percent confirming:2.35294
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:83
LEAP-Seq n unique pos:85

Suggested primers for confirmation by PCR

Suggested primer 1:AAATGTGGCGTGACGTGTTG
Suggested primer 2:CTTTGACGCAACGCACAAGA