Insertion junction: CLIP2.006206_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.006206
Chromosome:chromosome 12
Location:1937308
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g511650 (1 of 77) IPR001623 - DnaJ domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTGAGCATCCACGAAACTGGTTCGCCAGCGTGCTCTCATAGTCGTTGCG
Internal bar code:CTGTTGTACAAAGTGTATACCC

Confirmation - LEAP-Seq

LEAP-Seq distance:1519
LEAP-Seq percent confirming:96.4286
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:GCACGTCAAACACCATGTCC
Suggested primer 2:TTGATGACCTGCTCGGCTTT