Insertion junction: CLIP2.006209_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.006209
Chromosome:chromosome 1
Location:2345398
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g013150 CGLD35 Conserved in the Green Lineage and Diatoms; (1 of 1) K06995 - uncharacterized protein (K06995) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTACTGGCGCGACTGCGCCACGGCCACCCAAGCACCCTGCCAGCCCGCG
Internal bar code:GGGTGGGCGGAAGTCAAGTATC

Confirmation - LEAP-Seq

LEAP-Seq distance:3873
LEAP-Seq percent confirming:96.063
LEAP-Seq n confirming:122
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:127

Suggested primers for confirmation by PCR

Suggested primer 1:ACTGGGCACATCACTCTTGG
Suggested primer 2:ATGCGGTGTTGTTGCCATTC