Insertion junction: CLIP2.006213_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.006213
Chromosome:chromosome 3
Location:2099415
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g156500 (1 of 1) IPR000104//IPR016084 - Antifreeze protein, type I // Haem oxygenase-like, multi-helical intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCCCACCCAAGGCCACCTTGCGGGCCCGTTGGCCCGAGCCCTTACCCCC
Internal bar code:TATTGTGTGAAAATCTGCGTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2913
LEAP-Seq percent confirming:86.4583
LEAP-Seq n confirming:83
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:96

Suggested primers for confirmation by PCR

Suggested primer 1:AAGCCATGTCACCACCTAGC
Suggested primer 2:CAGTGCACAAACACACCTCG