Insertion junction: CLIP2.006213_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.006213
Chromosome:chromosome 3
Location:2099416
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g156500 (1 of 1) IPR000104//IPR016084 - Antifreeze protein, type I // Haem oxygenase-like, multi-helical intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGAAACAATGCCGGTCCTCATCAGCAGCACCTGTAGGAAATACCCGGC
Internal bar code:TTTTGGGTCTCGGTCAAGCCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:3483
LEAP-Seq percent confirming:75.7576
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:CAGTGCACAAACACACCTCG
Suggested primer 2:AAGCCATGTCACCACCTAGC