Insertion junction: CLIP2.006215_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.006215
Chromosome:chromosome 8
Location:478817
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g359100 TMG14,TRM11 tRNA guanosine-2'-O-methyltransferase, TRM11; (1 of 1) 2.1.1.214 - tRNA (guanine(10)-N(2))-methyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTTGGGCTGGTATCTACAACCCTCCTCCCCCCCCACCTTGGCCTGGTTG
Internal bar code:TTTCTTTAGCTAATGTCTACAG

Confirmation - LEAP-Seq

LEAP-Seq distance:360
LEAP-Seq percent confirming:7.14286
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:GGGGAGGAGGGAGGGTAATT
Suggested primer 2:ACGTCGGCACTTCACTTCAT