Insertion junction: CLIP2.006219_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.006219
Chromosome:chromosome 1
Location:5214981
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g036400 SDR3 Short-chain dehydrogenase/reductase; (1 of 1) 1.1.1.313 - Sulfoacetaldehyde reductase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTTGAGCAGCCTGCCCACACCCCTCCACCCTCCACCCCGCCTCCTCCTC
Internal bar code:TTAAGTATGTTAGTCGGTCTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:537
LEAP-Seq percent confirming:12.5
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:21
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:AACAATCCGTGCTCCGAAGT
Suggested primer 2:CATTACGGACATGCCTTGCG