Insertion junction: CLIP2.006223_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.006223
Chromosome:chromosome 8
Location:2510630
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre08.g372550 CDKB1,DIV48 plant specific cyclin dependent kinase; (1 of 1) K07760 - cyclin-dependent kinase [EC:2.7.11.22] (CDK) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATATCCTGCGTTATCTCAGCAAGCCCGCACCCAGCTGTTACTACTCCGC
Internal bar code:ACATGGGGCCTTGGGGAAGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:562
LEAP-Seq percent confirming:2.5
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:39
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:GCTACGTGGGTATCTGAGGC
Suggested primer 2:AATTGCGTGGTGAGTTGTGC